TY - JOUR
T1 - Verly large electronic structure calculations using an out-of-core filter-diagonalization method
AU - Toledo, Sivan
AU - Rabani, Eran
N1 - Funding Information:
This research was supported by the Israel Science Foundation, founded by the Israel Academy of Sciences and Humanities (grant 572/00, grant 9060/99, grant 34/00, and grant 9048/00) and by the University Research Fund
PY - 2002/7/20
Y1 - 2002/7/20
N2 - We present an out-of-core filter-diagonalization method which can be used to solve very large electronic structure problems within the framework of the one-electron pseudopotential-based methods. The approach is based on the following three steps. First, nonorthogonal states in a desired energy range are generated using the filter-diagonalization method. Next, these states are orthogonalized using the Householder QR orthogonalization method. Finally, the Hamiltonian is diagonalized within the subspace spanned by the orthogonal states generated in the second step. The main limiting step in the calculation is the orthogonalization step, which requires a huge main memory for large systems. To overcome this limitation we have developed and implemented an out-of-core orthogonalization method which allows us to store the states on disks without significantly slowing the computation. We apply the out-of-core filter-diagonalization method to solve the electronic structure of a quantum dot within the framework of the semiempirical pseudopotential method and show that problems which require tens of gigabytes to represents the electronic states and electronic density can be solved on a personal computer.
AB - We present an out-of-core filter-diagonalization method which can be used to solve very large electronic structure problems within the framework of the one-electron pseudopotential-based methods. The approach is based on the following three steps. First, nonorthogonal states in a desired energy range are generated using the filter-diagonalization method. Next, these states are orthogonalized using the Householder QR orthogonalization method. Finally, the Hamiltonian is diagonalized within the subspace spanned by the orthogonal states generated in the second step. The main limiting step in the calculation is the orthogonalization step, which requires a huge main memory for large systems. To overcome this limitation we have developed and implemented an out-of-core orthogonalization method which allows us to store the states on disks without significantly slowing the computation. We apply the out-of-core filter-diagonalization method to solve the electronic structure of a quantum dot within the framework of the semiempirical pseudopotential method and show that problems which require tens of gigabytes to represents the electronic states and electronic density can be solved on a personal computer.
KW - Electronic structure
KW - Out-of-core
KW - QR decomposition
KW - Singular-value decomposition
UR - http://www.scopus.com/inward/record.url?scp=0037142952&partnerID=8YFLogxK
U2 - 10.1006/jcph.2002.7090
DO - 10.1006/jcph.2002.7090
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AN - SCOPUS:0037142952
VL - 180
SP - 256
EP - 269
JO - Journal of Computational Physics
JF - Journal of Computational Physics
SN - 0021-9991
IS - 1
ER -