Trans-ancestry genome-wide study of depression identifies 697 associations implicating cell types and pharmacotherapies

Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium

Research output: Contribution to journalArticlepeer-review

5 Scopus citations

Abstract

In a genome-wide association study (GWAS) meta-analysis of 688,808 individuals with major depression (MD) and 4,364,225 controls from 29 countries across diverse and admixed ancestries, we identify 697 associations at 635 loci, 293 of which are novel. Using fine-mapping and functional tools, we find 308 high-confidence gene associations and enrichment of postsynaptic density and receptor clustering. A neural cell-type enrichment analysis utilizing single-cell data implicates excitatory, inhibitory, and medium spiny neurons and the involvement of amygdala neurons in both mouse and human single-cell analyses. The associations are enriched for antidepressant targets and provide potential repurposing opportunities. Polygenic scores trained using European or multi-ancestry data predicted MD status across all ancestries, explaining up to 5.8% of MD liability variance in Europeans. These findings advance our global understanding of MD and reveal biological targets that may be used to target and develop pharmacotherapies addressing the unmet need for effective treatment.

Original languageEnglish
Pages (from-to)640-652.e9
JournalCell
Volume188
Issue number3
DOIs
StatePublished - 6 Feb 2025

Funding

FundersFunder number
Northwestern University
Stanley Medical Research Institute
National Institute for Health and Care Research
National Institute of Neurological Disorders and Stroke
European Commission
Office of Research and Development
Million Veteran Program
King's College London
NIHR Maudsley Biomedical Research Centre and Maudsley NHS Foundation Trust
Wellcome Trust220857/Z/20/Z
Health Services Research and Development1IK2BX005058, I01CX001849
Horizon 2020948561, 847776
Novo Nordisk Fondenphs000187, phs000196
Lundbeck FoundationR155-2014-1724, R102-A9118
National Institutes of HealthMH124871, MH124873
Foundation for the National Institutes of HealthCA133996, ES011740, CA093459, CA097007

    Keywords

    • depression
    • drugs
    • enrichment
    • genetic
    • genome-wide association study
    • GWAS
    • neurons
    • pharmacotherapies
    • targets

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