The underappreciated role of allostery in the cellular network

Ruth Nussinov, Chung Jung Tsai, Buyong Ma

Research output: Contribution to journalArticlepeer-review

143 Scopus citations

Abstract

Small-angle X-ray scattering (SAXS) is a robust technique for the comprehensive structural characterizations of biological macromolecular complexes in solution. Here, we present a coherent synthesis of SAXS theory and experiment with a focus on analytical tools for accurate, objective, and high-throughput investigations. Perceived SAXS limitations are considered in light of its origins, and we present current methods that extend SAXS data analysis to the er-resolution regime. In particular, we discuss hybrid structural methods, illustrating the role of SAXS in structure refinement with NMR and ensemble refinement with single-molecule FRET. High-throughput genomics and proteomics are far outpacing macromolecular structure determinations, creating ormation gaps between the plethora of newly identified genes, known structures, and the structure-function relationship in the underlying biological networks. SAXS can bridge these ormation gaps by providing a reliable, high-throughput structural characterization of macromolecular complexes under physiological conditions.

Original languageEnglish
Pages (from-to)169-189
Number of pages21
JournalAnnual Review of Biophysics
Volume42
Issue number1
DOIs
StatePublished - May 2013

Funding

FundersFunder number
National Cancer InstituteZIABC010441

    Keywords

    • cellular pathways
    • conformational selection
    • induced fit
    • population shift
    • protein dynamics
    • regulation

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