TY - JOUR
T1 - The information-theory analysis of Michaelis-Menten constants for detection of breast cancer
AU - Blokh, David
AU - Stambler, Ilia
AU - Afrimzon, Elena
AU - Shafran, Yana
AU - Korech, Eden
AU - Sandbank, Judith
AU - Orda, Ruben
AU - Zurgil, Naomi
AU - Deutsch, Mordechai
N1 - Funding Information:
This research was supported by the Komen Foundation, by the Horowitz Foundation and by the US Army Medical Research and Materiel Command Grant DAMD17-01-1-0131.
PY - 2007
Y1 - 2007
N2 - Background: The Michaelis-Menten constants (Km and Vmax) operated by the Information Theory were employed for detection of breast cancer. Methods: The rate of enzymatic hydrolysis of fluorescein diacetate (FDA) in live peripheral blood mononuclear cells (PBMC), derived from healthy subjects and breast cancer (BC) patients, was assessed by measuring the fluorescence intensity (FI) in individual cells under incubation with either the mitogen phytohemagglutinin (PHA) or with tumor tissue, as compared to control. The data were processed by the Information Theory to determine the parameters and test conditions, which can best discriminate between the different groups. The normalized mutual information (uncertainty coefficients) was used as the measure of correlation/discrimination. Results: An estimated general correlation was established between the Km/Vmax parameters and the examined patterns in the different bioassays. The information-theoretical analysis revealed the relative diagnostic value of each parameter. Conclusion: It was found that Km and Vmax as individual parameters show relatively low correlations with the presence or absence of disease, yet in combination often provide a good diagnostic measure. Based on the relative diagnostic values of each parameter, a diagnostic decision making rule was constructed. The diagnostic rule provided correct diagnosis for 37 out of 40 subjects.
AB - Background: The Michaelis-Menten constants (Km and Vmax) operated by the Information Theory were employed for detection of breast cancer. Methods: The rate of enzymatic hydrolysis of fluorescein diacetate (FDA) in live peripheral blood mononuclear cells (PBMC), derived from healthy subjects and breast cancer (BC) patients, was assessed by measuring the fluorescence intensity (FI) in individual cells under incubation with either the mitogen phytohemagglutinin (PHA) or with tumor tissue, as compared to control. The data were processed by the Information Theory to determine the parameters and test conditions, which can best discriminate between the different groups. The normalized mutual information (uncertainty coefficients) was used as the measure of correlation/discrimination. Results: An estimated general correlation was established between the Km/Vmax parameters and the examined patterns in the different bioassays. The information-theoretical analysis revealed the relative diagnostic value of each parameter. Conclusion: It was found that Km and Vmax as individual parameters show relatively low correlations with the presence or absence of disease, yet in combination often provide a good diagnostic measure. Based on the relative diagnostic values of each parameter, a diagnostic decision making rule was constructed. The diagnostic rule provided correct diagnosis for 37 out of 40 subjects.
KW - Breast cancer (BC)
KW - Fluorescein hydrolysis
KW - Fluorescence intensity
KW - Formal diagnosis
KW - Individual cell assay
KW - Information Theory
KW - Michaelis-Menten constants (K, V)
KW - Mitogenic activation
KW - Peripheral blood mononuclear cells (PBMC)
KW - Uncertainty coefficient
UR - http://www.scopus.com/inward/record.url?scp=36549023317&partnerID=8YFLogxK
U2 - 10.1016/j.cdp.2007.10.010
DO - 10.1016/j.cdp.2007.10.010
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AN - SCOPUS:36549023317
SN - 0361-090X
VL - 31
SP - 489
EP - 498
JO - Cancer Detection and Prevention
JF - Cancer Detection and Prevention
IS - 6
ER -