TY - JOUR
T1 - Protein-protein interaction networks
T2 - how can a hub protein bind so many different partners?
AU - Tsai, Chung Jung
AU - Ma, Buyong
AU - Nussinov, Ruth
PY - 2009/12
Y1 - 2009/12
N2 - How can a single hub protein bind so many different partners? Numerous studies have sought differences between hubs and non-hubs to explain what makes a protein a hub and how a shared hub-binding site can be promiscuous, yet at the same time be specific. Here, we suggest that the problem is largely non-existent and resides in the popular representation of protein interaction networks: protein products derived from a single gene, even if different, are clustered in maps into a single node. This leads to the impression that a single protein binds to a very large number of partners. In reality, it does not; rather, protein networks reflect the combination of multiple proteins, each with a distinct conformation.
AB - How can a single hub protein bind so many different partners? Numerous studies have sought differences between hubs and non-hubs to explain what makes a protein a hub and how a shared hub-binding site can be promiscuous, yet at the same time be specific. Here, we suggest that the problem is largely non-existent and resides in the popular representation of protein interaction networks: protein products derived from a single gene, even if different, are clustered in maps into a single node. This leads to the impression that a single protein binds to a very large number of partners. In reality, it does not; rather, protein networks reflect the combination of multiple proteins, each with a distinct conformation.
UR - http://www.scopus.com/inward/record.url?scp=70449769325&partnerID=8YFLogxK
U2 - 10.1016/j.tibs.2009.07.007
DO - 10.1016/j.tibs.2009.07.007
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AN - SCOPUS:70449769325
SN - 0968-0004
VL - 34
SP - 594
EP - 600
JO - Trends in Biochemical Sciences
JF - Trends in Biochemical Sciences
IS - 12
ER -