TY - JOUR
T1 - Extended disordered proteins
T2 - Targeting function with less scaffold
AU - Gunasekaran, Kannan
AU - Tsai, Chung Jung
AU - Kumar, Sandeep
AU - Zanuy, David
AU - Nussinov, Ruth
N1 - Funding Information:
We thank J.V. Maizel for discussions and encouragement. The research of R.N. in Israel has been supported in part by the Ministry of Science, by the Center of Excellence in Geometric Computing and its Applications funded by the Israel Science Foundation (administered by the Israel Academy of Sciences) and by the Adams Brain Center of Tel Aviv University. This work has been funded, in whole or in part, with Federal funds from the National Cancer Institute, National Institutes of Health, under contract number NO1-CO-12400.
PY - 2003/2/1
Y1 - 2003/2/1
N2 - It has been estimated that a large fraction of cellular proteins are natively disordered. Current opinion largely holds that natively disordered proteins are more 'adaptive', leading to advantages in regulation and in binding diverse ligands. Here, we argue for another, simple, physically based reason. Disordered proteins often have large intermolecular interfaces, the size of which is dictated by protein function. For proteins to be stable as monomers with extensive interfaces, protein size would need to be 2-3 times larger. This would either increase cellular crowding or enlarge the size of the cell by 15-30%, owing to the increase in the sequence length. Smaller sizes of cells, proteins, DNA and RNA conserve energy. Thus, disordered proteins provide a simple yet elegant solution to having large intermolecular interfaces, but with smaller protein, genome and cell sizes.
AB - It has been estimated that a large fraction of cellular proteins are natively disordered. Current opinion largely holds that natively disordered proteins are more 'adaptive', leading to advantages in regulation and in binding diverse ligands. Here, we argue for another, simple, physically based reason. Disordered proteins often have large intermolecular interfaces, the size of which is dictated by protein function. For proteins to be stable as monomers with extensive interfaces, protein size would need to be 2-3 times larger. This would either increase cellular crowding or enlarge the size of the cell by 15-30%, owing to the increase in the sequence length. Smaller sizes of cells, proteins, DNA and RNA conserve energy. Thus, disordered proteins provide a simple yet elegant solution to having large intermolecular interfaces, but with smaller protein, genome and cell sizes.
UR - http://www.scopus.com/inward/record.url?scp=0037309985&partnerID=8YFLogxK
U2 - 10.1016/S0968-0004(03)00003-3
DO - 10.1016/S0968-0004(03)00003-3
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AN - SCOPUS:0037309985
SN - 0968-0004
VL - 28
SP - 81
EP - 85
JO - Trends in Biochemical Sciences
JF - Trends in Biochemical Sciences
IS - 2
ER -