TY - JOUR
T1 - Evolutionary plasticity of methionine biosynthesis
AU - Gophna, Uri
AU - Bapteste, Eric
AU - Doolittle, W. Ford
AU - Biran, Dvora
AU - Ron, Eliora Z.
N1 - Funding Information:
UG is supported by a Killam Postdoctoral Fellowship, WFD by the Canada Research Chair Program, EB by Genome Atlantic, EZR by Manja and Morris Leigh Chair for Biophysics and Biotechnology and this research by the Canadian Institutes for Health Research. The authors wish to thank Sharon Gophna for technical assistance in sequence analysis and David A. Walsh for critical reading of the manuscript.
PY - 2005/8/1
Y1 - 2005/8/1
N2 - Methionine is an essential cellular constituent, the initiator of protein synthesis and a precursor in many metabolic activities, such as methylation and formylation. Here we investigate the genomic distribution of the methionine biosynthetic pathway and analyze its evolutionary history by reconstructing the phylogeny of its enzymatic components. We demonstrate the evolutionary complexity of methionine synthesis and describe the various mechanisms that have shaped this biosynthetic pathway: gene duplication, functional reassignment, lateral acquisition and gene loss. Lateral gene transfer within and between domains and gene recruitment have played an important role in the evolution of this pathway, especially in its first and third enzymatic steps-homoserine activation and homocysteine methylation. These analyses are also the basis of predictions regarding methionine synthesis in Archaea, where the pathway is yet to be characterized. This study illustrates how diverse molecular solutions can fulfill a conserved function in living beings.
AB - Methionine is an essential cellular constituent, the initiator of protein synthesis and a precursor in many metabolic activities, such as methylation and formylation. Here we investigate the genomic distribution of the methionine biosynthetic pathway and analyze its evolutionary history by reconstructing the phylogeny of its enzymatic components. We demonstrate the evolutionary complexity of methionine synthesis and describe the various mechanisms that have shaped this biosynthetic pathway: gene duplication, functional reassignment, lateral acquisition and gene loss. Lateral gene transfer within and between domains and gene recruitment have played an important role in the evolution of this pathway, especially in its first and third enzymatic steps-homoserine activation and homocysteine methylation. These analyses are also the basis of predictions regarding methionine synthesis in Archaea, where the pathway is yet to be characterized. This study illustrates how diverse molecular solutions can fulfill a conserved function in living beings.
KW - Cystathionine
KW - Evolutionary patchwork
KW - Homocysteine
KW - Homoserine trans-acetylase
KW - Homoserine trans-succinylase
KW - Horizontal gene transfer
UR - http://www.scopus.com/inward/record.url?scp=23644442434&partnerID=8YFLogxK
U2 - 10.1016/j.gene.2005.05.028
DO - 10.1016/j.gene.2005.05.028
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AN - SCOPUS:23644442434
SN - 0378-1119
VL - 355
SP - 48
EP - 57
JO - Gene
JF - Gene
IS - 1-2
ER -