TY - JOUR
T1 - E23D
T2 - Database and visualization of A-to-I RNA editing sites mapped to 3D protein structures
AU - Solomon, Oz
AU - Eyal, Eran
AU - Amariglio, Ninette
AU - Unger, Ron
AU - Rechavi, Gidi
N1 - Publisher Copyright:
© 2016 The Author 2016. Published by Oxford University Press. All rights reserved.
PY - 2016/7/15
Y1 - 2016/7/15
N2 - e23D, a database of A-to-I RNA editing sites from human, mouse and fly mapped to evolutionary related protein 3D structures, is presented. Genomic coordinates of A-to-I RNA editing sites are converted to protein coordinates and mapped onto 3D structures from PDB or theoretical models from ModBase. e23D allows visualization of the protein structure, modeling of recoding events and orientation of the editing with respect to nearby genomic functional sites from databases of disease causing mutations and genomic polymorphism. Availability and Implementation: http://www.sheba-cancer.org.il/e23D Contact: or [email protected].
AB - e23D, a database of A-to-I RNA editing sites from human, mouse and fly mapped to evolutionary related protein 3D structures, is presented. Genomic coordinates of A-to-I RNA editing sites are converted to protein coordinates and mapped onto 3D structures from PDB or theoretical models from ModBase. e23D allows visualization of the protein structure, modeling of recoding events and orientation of the editing with respect to nearby genomic functional sites from databases of disease causing mutations and genomic polymorphism. Availability and Implementation: http://www.sheba-cancer.org.il/e23D Contact: or [email protected].
UR - http://www.scopus.com/inward/record.url?scp=84992344907&partnerID=8YFLogxK
U2 - 10.1093/bioinformatics/btw204
DO - 10.1093/bioinformatics/btw204
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AN - SCOPUS:84992344907
SN - 1367-4803
VL - 32
SP - 2213
EP - 2215
JO - Bioinformatics
JF - Bioinformatics
IS - 14
ER -
