TY - JOUR
T1 - Classification of tissue biopsies by Raman spectroscopy guided by quantitative phase imaging and its application to bladder cancer
AU - Taieb, Almog
AU - Berkovic, Garry
AU - Haifler, Miki
AU - Cheshnovsky, Ori
AU - Shaked, Natan T.
N1 - Publisher Copyright:
© 2022 Wiley-VCH GmbH.
PY - 2022/8
Y1 - 2022/8
N2 - We present a multimodal label-free optical measurement approach for analyzing sliced tissue biopsies by a unique combination of quantitative phase imaging and localized Raman spectroscopy. First, label-free quantitative phase imaging of the entire unstained tissue slice is performed using automated scanning. Then, pixel-wise segmentation of the tissue layers is performed by a kernelled structural support vector machine based on Haralick texture features, which are extracted from the quantitative phase profile, and used to find the best locations for performing the label-free localized Raman measurements. We use this multimodal label-free measurement approach for segmenting the urothelium in benign and malignant bladder cancer tissues by quantitative phase imaging, followed by location-guided Raman spectroscopy measurements. We then use sparse multinomial logistic regression (SMLR) on the Raman spectroscopy measurements to classify the tissue types, demonstrating that the prior segmentation of the urothelium done by label-free quantitative phase imaging improves the Raman spectra classification accuracy from 85.7% to 94.7%.
AB - We present a multimodal label-free optical measurement approach for analyzing sliced tissue biopsies by a unique combination of quantitative phase imaging and localized Raman spectroscopy. First, label-free quantitative phase imaging of the entire unstained tissue slice is performed using automated scanning. Then, pixel-wise segmentation of the tissue layers is performed by a kernelled structural support vector machine based on Haralick texture features, which are extracted from the quantitative phase profile, and used to find the best locations for performing the label-free localized Raman measurements. We use this multimodal label-free measurement approach for segmenting the urothelium in benign and malignant bladder cancer tissues by quantitative phase imaging, followed by location-guided Raman spectroscopy measurements. We then use sparse multinomial logistic regression (SMLR) on the Raman spectroscopy measurements to classify the tissue types, demonstrating that the prior segmentation of the urothelium done by label-free quantitative phase imaging improves the Raman spectra classification accuracy from 85.7% to 94.7%.
KW - Raman spectroscopy
KW - quantitative phase microscopy
KW - segmentation
KW - tissue classification
UR - http://www.scopus.com/inward/record.url?scp=85130217971&partnerID=8YFLogxK
U2 - 10.1002/jbio.202200009
DO - 10.1002/jbio.202200009
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C2 - 35488750
AN - SCOPUS:85130217971
SN - 1864-063X
VL - 15
JO - Journal of Biophotonics
JF - Journal of Biophotonics
IS - 8
M1 - e202200009
ER -