BRCA2 Polymorphic Stop Codon K3326X and the Risk of Breast, Prostate, and Ovarian Cancers

Australia Ovarian Cancer Study Group, emBRAce, OCGN, PRostate cancer Asso Ciation group To Investigate Cancer Associated aLterations in the genome, GEMO Study Collaborators, HEBON

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Abstract

Background: The K3326X variant in BRCA2 (BRCA2∗c.9976A>T p.Lys3326∗rs11571833) has been found to be associated with small increased risks of breast cancer. However, it is not clear to what extent linkage disequilibrium with fully pathogenic mutations might account for this association. There is scant information about the effect of K3326X in other hormonerelated cancers. Methods: Using weighted logistic regression, we analyzed data from the large iCOGS study including 76637 cancer case patients and 83796 control patients to estimate odds ratios (ORw) and 95% confidence intervals (CIs) for K3326X variant carriers in relation to breast, ovarian, and prostate cancer risks, with weights defined as probability of not having a pathogenic BRCA2 variant. Using Cox proportional hazards modeling, we also examined the associations of K3326X with breast and ovarian cancer risks among 7183 BRCA1 variant carriers. All statistical tests were two-sided. Results: The K3326X variant was associated with breast (ORw = 1.28, 95% CI = 1.17 to 1.40, P = 5.9×10-6) and invasive ovarian cancer (ORw = 1.26, 95% CI = 1.10 to 1.43, P = 3.8×10-3). These associations were stronger for serous ovarian cancer and for estrogen receptor-negative breast cancer (ORw = 1.46, 95% CI = 1.2 to 1.70, P = 3.4×10-5 and ORw = 1.50, 95% CI = 1.28 to 1.76, P = 4.1×10-5, respectively). For BRCA1 mutation carriers, there was a statistically significant inverse association of the K3326X variant with risk of ovarian cancer (HR = 0.43, 95% CI = 0.22 to 0.84, P = .013) but no association with breast cancer. No association with prostate cancer was observed. Conclusions: Our study provides evidence that the K3326X variant is associated with risk of developing breast and ovarian cancers independent of other pathogenic variants in BRCA2. Further studies are needed to determine the biological mechanism of action responsible for these associations.

Original languageEnglish
JournalJournal of the National Cancer Institute
Volume108
Issue number2
DOIs
StatePublished - 1 Feb 2016
Externally publishedYes

Funding

FundersFunder number
Government of Canada
Genome Canada
Breast Cancer Research Foundation
Génome Québec
Wellcome Trust Case Control Consortium
National Institutes of Health
European Commission
Ministère de l'Économie, de l’Innovation et des Exportations du Québec
Komen Foundation for the Cure
Canadian Institutes of Health Research
National Cancer InstituteR01CA176785, P30CA008748, P30CA015083, P50CA116201, U19CA148112, U01CA116167, ZIACP010144, P30CA006927, U10CA180868, UG1CA189867, R01CA128978
National Health and Medical Research Council1010719, 504711, 199600
U.S. Department of DefenseW81XWH-10-1-0341
Not added184.021.007
Seventh Framework Programme223175
National Human Genome Research Institute1U19 CA148537, C5047/A10692, C5047/A8384, C1287/A 10710, 1U19 CA148065, C1281/A12014, C5047/A15007, C8197/A16565
Mayo ClinicP50 CA116201
European Community''s Seventh Framework ProgrammeHEALTH-F2-2009-223175
Medical Research CouncilMR/N005813/1
European Union COSTBM0606
Cancer Research UKC1287/A12014, C1287/A10118
Ovarian Cancer Research FundPPD/RPCI.07, U19-CA148112
Wellcome Trust076113
CIMBAC12292/A11174

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