An Optimized Tat/Rev Induced Limiting Dilution Assay for the Characterization of HIV-1 Latent Reservoirs

Swarnima Mishra, Yuvrajsinh Gohil, Kavita Mehta, Anish D'silva, Afzal Amanullah, Deepak Selvam, Neelam Pargain, Narendra Nala, G. N. Sanjeeva, Udaykumar Ranga*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

The administration of antiretroviral therapy (ART) leads to a rapid reduction in plasma viral load in HIV-1 seropositive subjects. However, when ART is suspended, the virus rebounds due to the presence of a latent viral reservoir. Several techniques have been developed to characterize this latent viral reservoir. Of the various assay formats available presently, the Tat/Rev induced limiting dilution assay (TILDA) offers the most robust and technically simple assay strategy. The TILDA formats reported thus far are limited by being selective to one or a few HIV-1 genetic subtypes, thus, restricting them from a broader level application. The novel TILDA, labelled as U-TILDA ('U' for universal), can detect all the major genetic subtypes of HIV-1 unbiasedly, and with comparable sensitivity of detection. U-TILDA is well suited to characterize the latent reservoirs of HIV-1 and aid in the formulation of cure strategies.

Original languageEnglish
Article numbere4391
JournalBio-protocol
Volume12
Issue number8
DOIs
StatePublished - 20 Apr 2022
Externally publishedYes

Keywords

  • HIV-1
  • HIV-1 latency
  • Latent reservoir
  • TILDA
  • Transcriptional silence

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