TY - JOUR
T1 - An adaptive mean-shift framework for MRI brain segmentation
AU - Mayer, Arnaldo
AU - Greenspan, Hayit
N1 - Funding Information:
Manuscript received November 13, 2008; revised January 06, 2009. First published February 10, 2009; current version published July 29, 2009. This work was supported in part by a Strategic Research Directions Grant from the Israeli Ministry of Science. Asterisk indicates corresponding author. *A. Mayer is with the Medical Image Processing Laboratory, Tel-Aviv University, Tel-Aviv, Israel (e-mail: [email protected]). H. Greenspan is with the Medical Image Processing Laboratory, Tel-Aviv University, Tel-Aviv, Israel (e-mail: [email protected]). Color versions of one or more of the figures in this paper are available online at http://ieeexplore.ieee.org. Digital Object Identifier 10.1109/TMI.2009.2013850
PY - 2009/8
Y1 - 2009/8
N2 - An automated scheme for magnetic resonance imaging (MRI) brain segmentation is proposed. An adaptive mean-shift methodology is utilized in order to classify brain voxels into one of three main tissue types: gray matter, white matter, and Cerebro-spinal fluid. The MRI image space is represented by a high-dimensional feature space that includes multimodal intensity features as well as spatial features. An adaptive mean-shift algorithm clusters the joint spatial-intensity feature space, thus extracting a representative set of high-density points within the feature space, otherwise known as modes. Tissue segmentation is obtained by a follow-up phase of intensity-based mode clustering into the three tissue categories. By its nonparametric nature, adaptive mean-shift can deal successfully with nonconvex clusters and produce convergence modes that are better candidates for intensity based classification than the initial voxels. The proposed method is validated on 3-D single and multimodal datasets, for both simulated and real MRI data. It is shown to perform well in comparison to other state-of-the-art methods without the use of a preregistered statistical brain atlas.
AB - An automated scheme for magnetic resonance imaging (MRI) brain segmentation is proposed. An adaptive mean-shift methodology is utilized in order to classify brain voxels into one of three main tissue types: gray matter, white matter, and Cerebro-spinal fluid. The MRI image space is represented by a high-dimensional feature space that includes multimodal intensity features as well as spatial features. An adaptive mean-shift algorithm clusters the joint spatial-intensity feature space, thus extracting a representative set of high-density points within the feature space, otherwise known as modes. Tissue segmentation is obtained by a follow-up phase of intensity-based mode clustering into the three tissue categories. By its nonparametric nature, adaptive mean-shift can deal successfully with nonconvex clusters and produce convergence modes that are better candidates for intensity based classification than the initial voxels. The proposed method is validated on 3-D single and multimodal datasets, for both simulated and real MRI data. It is shown to perform well in comparison to other state-of-the-art methods without the use of a preregistered statistical brain atlas.
KW - Adaptive mean-shift
KW - Brain magnetic resonance imaging (MRI)
KW - Segmentation
UR - http://www.scopus.com/inward/record.url?scp=68249111619&partnerID=8YFLogxK
U2 - 10.1109/TMI.2009.2013850
DO - 10.1109/TMI.2009.2013850
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AN - SCOPUS:68249111619
SN - 0278-0062
VL - 28
SP - 1238
EP - 1250
JO - IEEE Transactions on Medical Imaging
JF - IEEE Transactions on Medical Imaging
IS - 8
M1 - 4781563
ER -