TY - JOUR
T1 - Accelerated reconstruction of dictionary-based T2 relaxation maps based on dictionary compression and gradient descent search algorithms
AU - Shpringer, Guy
AU - Bendahan, David
AU - Ben-Eliezer, Noam
N1 - Publisher Copyright:
© 2021 Elsevier Inc.
PY - 2022/4
Y1 - 2022/4
N2 - Background Quantitative T2-relaxation-based contrast maps have shown to be highly beneficial for clinical diagnosis and follow-up. The generation of quantitative maps, however, is impaired by long acquisition times, and time-consuming post-processing schemes. The EMC platform is a dictionary-based technique, which involves simulating theoretical signal curves for different physical and experimental values, followed by matching the experimentally acquired signals to the set simulated ones. Purpose Although the EMC technique has shown to produce accurate T2 maps, it involves computationally intensive post-processing procedures. In this work we present an approach for accelerating the reconstruction of T2 relaxation maps. Methods This work presents two alternative post-processing approaches for accelerating the reconstruction of EMC-based T2 relaxation maps. These are (a) Dictionary compression using principal component analysis (PCA) and (b) gradient-descent search algorithm. Additional acceleration was achieved by finding the optimal MATLAB C++ compiler. The utility of the two suggested approaches was examined by calculating the relative error, produced by each technique. Results Gradient descent method was in perfect agreement with the ground truth exhaustive search matching process. PCA based acceleration produced root mean square error (RMSE) of up to 4% compared to exhaustive matching process. Overall acceleration of x16 was achieved using gradient descent in addition to x7 acceleration by choosing the optimal MATLAB C++ compiler. Conclusions Postprocessing of EMC-based T2 relaxation maps can be accelerated without impairing the accuracy of the ensuing T2 values.
AB - Background Quantitative T2-relaxation-based contrast maps have shown to be highly beneficial for clinical diagnosis and follow-up. The generation of quantitative maps, however, is impaired by long acquisition times, and time-consuming post-processing schemes. The EMC platform is a dictionary-based technique, which involves simulating theoretical signal curves for different physical and experimental values, followed by matching the experimentally acquired signals to the set simulated ones. Purpose Although the EMC technique has shown to produce accurate T2 maps, it involves computationally intensive post-processing procedures. In this work we present an approach for accelerating the reconstruction of T2 relaxation maps. Methods This work presents two alternative post-processing approaches for accelerating the reconstruction of EMC-based T2 relaxation maps. These are (a) Dictionary compression using principal component analysis (PCA) and (b) gradient-descent search algorithm. Additional acceleration was achieved by finding the optimal MATLAB C++ compiler. The utility of the two suggested approaches was examined by calculating the relative error, produced by each technique. Results Gradient descent method was in perfect agreement with the ground truth exhaustive search matching process. PCA based acceleration produced root mean square error (RMSE) of up to 4% compared to exhaustive matching process. Overall acceleration of x16 was achieved using gradient descent in addition to x7 acceleration by choosing the optimal MATLAB C++ compiler. Conclusions Postprocessing of EMC-based T2 relaxation maps can be accelerated without impairing the accuracy of the ensuing T2 values.
KW - Dictionary compression
KW - Gradient descent
KW - Magnetic resonance imaging
KW - Principal component analysis
KW - T mapping
UR - http://www.scopus.com/inward/record.url?scp=85122137677&partnerID=8YFLogxK
U2 - 10.1016/j.mri.2021.12.006
DO - 10.1016/j.mri.2021.12.006
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C2 - 34973389
AN - SCOPUS:85122137677
SN - 0730-725X
VL - 87
SP - 56
EP - 66
JO - Magnetic Resonance Imaging
JF - Magnetic Resonance Imaging
ER -