TY - JOUR
T1 - A-to-I RNA editing in the earliest-diverging eumetazoan phyla
AU - Porath, Hagit T.
AU - Schaffer, Amos A.
AU - Kaniewska, Paulina
AU - Alon, Shahar
AU - Eisenberg, Eli
AU - Rosenthal, Joshua
AU - Levanon, Erez Y.
AU - Levy, Oren
N1 - Publisher Copyright:
© The Author 2017.
PY - 2017/8/1
Y1 - 2017/8/1
N2 - The highly conservedADARenzymes, found in allmulticellularmetazoans, catalyze the editing ofmRNAtranscripts by the deamination of adenosines to inosines. This type of editing has two general outcomes: site specific editing,which frequently leads to recoding, and clustered editing, which is usually found in transcribed genomic repeats. Here, for the first time, we looked for both editing of isolated sites and clustered, non-specific sites in a basalmetazoan, the coral Acropora millepora during spawning event, in order to reveal its editing pattern.We found that the coral editome resembles the mammalian one: it contains more than 500,000 sites, virtually all of which are clustered in non-coding regions that are enriched for predicted dsRNA structures. RNA editing levels were increased during spawning and increased further still in newly released gametes. This may suggest that editing plays a role in introducing variability in coral gametes.
AB - The highly conservedADARenzymes, found in allmulticellularmetazoans, catalyze the editing ofmRNAtranscripts by the deamination of adenosines to inosines. This type of editing has two general outcomes: site specific editing,which frequently leads to recoding, and clustered editing, which is usually found in transcribed genomic repeats. Here, for the first time, we looked for both editing of isolated sites and clustered, non-specific sites in a basalmetazoan, the coral Acropora millepora during spawning event, in order to reveal its editing pattern.We found that the coral editome resembles the mammalian one: it contains more than 500,000 sites, virtually all of which are clustered in non-coding regions that are enriched for predicted dsRNA structures. RNA editing levels were increased during spawning and increased further still in newly released gametes. This may suggest that editing plays a role in introducing variability in coral gametes.
KW - ADAR
KW - Coral
KW - Evolution
KW - RNA editing
UR - http://www.scopus.com/inward/record.url?scp=85028374354&partnerID=8YFLogxK
U2 - 10.1093/molbev/msx125
DO - 10.1093/molbev/msx125
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AN - SCOPUS:85028374354
SN - 0737-4038
VL - 34
SP - 1890
EP - 1901
JO - Molecular Biology and Evolution
JF - Molecular Biology and Evolution
IS - 8
ER -