A new mitochondrial gene order in the banded cusk-eel Raneya brasiliensis (Actinopterygii, Ophidiiformes)

Amir Fromm; Stephen D. Atkinson; Gema Alama-Bermejo; Paulyn Cartwright; Jerri L. Bartholomew; Dorothée Huchon

doi:10.1080/23802359.2018.1532824

A new mitochondrial gene order in the banded cusk-eel Raneya brasiliensis (Actinopterygii, Ophidiiformes)

Amir Fromm, Stephen D. Atkinson, Gema Alama-Bermejo, Paulyn Cartwright, Jerri L. Bartholomew, Dorothée Huchon^*

^*Corresponding author for this work

School of Zoology

Research output: Contribution to journal › Article › peer-review

Abstract

The complete mitochondrial genome of the banded cusk-eel, Raneya brasilensis (Kaup, 1856), was obtained using next-generation sequencing approaches. The genome sequence was 16,881 bp and exhibited a novel gene order for a vertebrate. Specifically, the WANCY and the nd6–D-loop regions were re-ordered, supporting the hypothesis that these two regions are hotspots for gene rearrangements in Actinopterygii. Phylogenetic reconstructions confirmed that R. brasiliensis is nested within Ophidiiformes. Mitochondrial genomes are required from additional ophidiins to determine whether the gene rearrangements that we observed are specific to the genus Raneya or to the subfamily Ophidiinae.

Original language	English
Pages (from-to)	1-4
Number of pages	4
Journal	Mitochondrial DNA Part B: Resources
Volume	4
Issue number	1
DOIs	https://doi.org/10.1080/23802359.2018.1532824
State	Published - 2 Jan 2019

Keywords

Ophidiidae
mitogenomics
next-generation sequencing
phylogeny

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10.1080/23802359.2018.1532824

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abstract = "The complete mitochondrial genome of the banded cusk-eel, Raneya brasilensis (Kaup, 1856), was obtained using next-generation sequencing approaches. The genome sequence was 16,881 bp and exhibited a novel gene order for a vertebrate. Specifically, the WANCY and the nd6–D-loop regions were re-ordered, supporting the hypothesis that these two regions are hotspots for gene rearrangements in Actinopterygii. Phylogenetic reconstructions confirmed that R. brasiliensis is nested within Ophidiiformes. Mitochondrial genomes are required from additional ophidiins to determine whether the gene rearrangements that we observed are specific to the genus Raneya or to the subfamily Ophidiinae.",

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AU - Cartwright, Paulyn

AU - Bartholomew, Jerri L.

AU - Huchon, Dorothée

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A new mitochondrial gene order in the banded cusk-eel Raneya brasiliensis (Actinopterygii, Ophidiiformes)

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Keywords

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