Research output per year
Research output per year
- 1 - 50 out of 159 results
Search results
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2024
A comparison of centrality measures and their role in controlling the spread in epidemic networks
Dudkina, E., Bin, M., Breen, J., Crisostomi, E., Ferraro, P., Kirkland, S., Mareček, J., Murray-Smith, R., Parisini, T., Stone, L., Yilmaz, S. & Shorten, R., 2024, In: International Journal of Control. 97, 6, p. 1325-1340 16 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Assessing the impact of Australia’s mass vaccination campaigns over the Delta and Omicron outbreaks
Lin, L., Demirhan, H., Johnstone-Robertson, S. P., Lal, R., Trauer, J. M. & Stone, L., Apr 2024, In: PLoS ONE. 19, 4, e0299844.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Modelling the unexpected dynamics of COVID-19 in Manaus, Brazil
He, D., Artzy-Randrup, Y., Musa, S. S., Gräf, T., Naveca, F. & Stone, L., Jun 2024, In: Infectious Disease Modelling. 9, 2, p. 557-568 12 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Quantifying indirect and direct vaccination effects arising in the SIR model
Lin, L., Hamedmoghadam, H., Shorten, R. & Stone, L., 18 Sep 2024, In: Journal of the Royal Society Interface. 21, 218, 20240299.Research output: Contribution to journal › Article › peer-review
Open Access -
Switching checkerboards in (0,1)-matrices
Ellison, D., Jouve, B. & Stone, L., 1 Jan 2024, In: Linear Algebra and Its Applications. 680, p. 274-292 19 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
2023
Discovering Important Nodes of Complex Networks Based on Laplacian Spectra
Amani, A. M., Fiol, M. A., Jalili, M., Chen, G., Yu, X. & Stone, L., 1 Oct 2023, In: IEEE Transactions on Circuits and Systems I: Regular Papers. 70, 10, p. 4146-4158 13 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Rapid global spread of variants of concern of SARS-CoV-2
He, D., Cowling, B. J., Ali, S. T. & Stone, L., Jun 2023, In: IJID Regions. 7, p. 63-65 3 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Resolving the enigma of Iquitos and Manaus: A modeling analysis of multiple COVID-19 epidemic waves in two Amazonian cities
He, D., Lin, L., Artzy-Randrup, Y., Demirhan, H., Cowling, B. J. & Stone, L., 7 Mar 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 10, e2211422120.Research output: Contribution to journal › Article › peer-review
Open Access10 Scopus citations -
The immune evasion ability of Delta variant is comparable to that of Beta variant in South Africa
He, D., Chen, B., Zhao, S. & Stone, L., Dec 2023, In: BMC Public Health. 23, 1, 511.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
2022
A machine learning method for estimating the probability of presence using presence-background data
Wang, Y., Samarasekara, C. L. & Stone, L., Jun 2022, In: Ecology and Evolution. 12, 6, e8998.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Evaluation of Effectiveness of Global COVID-19 Vaccination Campaign
He, D., Ali, S. T., Fan, G., Gao, D., Song, H., Lou, Y., Zhao, S., Cowling, B. J. & Stone, L., Sep 2022, In: Emerging Infectious Diseases. 28, 9, p. 1873-1876 4 p.Research output: Contribution to journal › Article › peer-review
Open Access19 Scopus citations -
Modelling COVID-19 vaccine breakthrough infections in highly vaccinated Israel-The effects of waning immunity and third vaccination dose
Feng, A., Obolski, U., Stone, L. & He, D., Nov 2022, In: PLOS Global Public Health. 2, 11 November, e0001211.Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
2021
Automated extraction of origin-destination demand for public transportation from smartcard data with pattern recognition
Hamedmoghadam, H., Vu, H. L., Jalili, M., Saberi, M., Stone, L. & Hoogendoorn, S., Aug 2021, In: Transportation Research Part C: Emerging Technologies. 129, 103210.Research output: Contribution to journal › Article › peer-review
10 Scopus citations -
Effectiveness of joint species distribution models in the presence of imperfect detection
Hogg, S. E., Wang, Y. & Stone, L., Aug 2021, In: Methods in Ecology and Evolution. 12, 8, p. 1458-1474 17 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Inferring extinction date of a species using non-homogeneous Poisson processes with a change-point
Kodikara, S., Demirhan, H., Wang, Y. & Stone, L., Mar 2021, In: Methods in Ecology and Evolution. 12, 3, p. 530-538 9 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Percolation of heterogeneous flows uncovers the bottlenecks of infrastructure networks
Hamedmoghadam, H., Jalili, M., Vu, H. L. & Stone, L., 1 Dec 2021, In: Nature Communications. 12, 1, 1254.Research output: Contribution to journal › Article › peer-review
Open Access57 Scopus citations -
Post-lockdown abatement of COVID-19 by fast periodic switching
Bin, M., Cheung, P. Y. K., Crisostomi, E., Ferraro, P., Lhachemi, H., Murray-Smith, R., Myant, C., Parisini, T., Shorten, R., Stein, S. & Stone, L., 21 Jan 2021, In: PLoS Computational Biology. 17, 1, e1008604.Research output: Contribution to journal › Article › peer-review
Open Access58 Scopus citations -
2020
Coherence of dengue incidence and climate in the wet and dry zones of Sri Lanka
Prabodanie, R. A. R., Schreider, S., Cazelles, B. & Stone, L., 1 Jul 2020, In: Science of the Total Environment. 724, 138269.Research output: Contribution to journal › Article › peer-review
7 Scopus citations -
Difficulties in benchmarking ecological null models: an assessment of current methods
Molina, C. & Stone, L., 1 Mar 2020, In: Ecology. 101, 3, e02945.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Distributed Rigidity Recovery in Distance-Based Formations Using Configuration Lattice
Amani, A. M., Chen, G., Jalili, M., Yu, X. & Stone, L., Sep 2020, In: IEEE Transactions on Control of Network Systems. 7, 3, p. 1547-1558 12 p., 9054994.Research output: Contribution to journal › Article › peer-review
7 Scopus citations -
Extraordinary curtailment of massive typhus epidemic in the Warsaw Ghetto
Stone, L., He, D., Lehnstaedt, S. & Artzy-Randrup, Y., Jul 2020, In: Science advances. 6, 30, abc0927.Research output: Contribution to journal › Article › peer-review
Open Access16 Scopus citations -
High-resolution inference of genetic relationships among Jewish populations
Kopelman, N. M., Stone, L., Hernandez, D. G., Gefel, D., Singleton, A. B., Heyer, E., Feldman, M. W., Hillel, J. & Rosenberg, N. A., 1 Jun 2020, In: European Journal of Human Genetics. 28, 6, p. 804-814 11 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Inferring extinction year using a Bayesian approach
Kodikara, S., Demirhan, H., Wang, Y., Solow, A. & Stone, L., 1 Aug 2020, In: Methods in Ecology and Evolution. 11, 8, p. 964-973 10 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Kemeny-based testing for COVID-19
Yilmaz, S., Dudkina, E., Bin, M., Crisostomi, E., Ferraro, P., Murray-Smith, R., Parisini, T., Stone, L. & Shorten, R., Nov 2020, In: PLoS ONE. 15, 11 November, e0242401.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
New estimates of the zika virus epidemic attack rate in northeastern Brazil from 2015 to 2016: A modelling analysis based on Guillain-Barré syndrome (GBS) surveillance data
He, D., Zhao, S., Lin, Q., Musaid, S. S. & Stone, L., Apr 2020, In: PLoS Neglected Tropical Diseases. 14, 4, p. 1-23 23 p., e0007502.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
Spatiotemporal patterns of dengue outbreaks in Sri Lanka
Prabodanie, R. A. R., Stone, L. & Schreider, S., 3 May 2020, In: Infectious Diseases. 52, 5, p. 350-360 11 p.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
The stability of mutualism
Stone, L., 1 Dec 2020, In: Nature Communications. 11, 1, 2648.Research output: Contribution to journal › Article › peer-review
Open Access22 Scopus citations -
Using survival theory models to quantify extinctions
Thompson, C. J., Kodikara, S., Burgman, M. A., Demirhan, H. & Stone, L., Jan 2020, In: Biological Conservation. 241, 108345.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
2019
Adaptive wavelet estimation of a function from an m-dependent process with possibly unbounded m
Chesneau, C., Doosti, H. & Stone, L., 4 Mar 2019, In: Communications in Statistics - Theory and Methods. 48, 5, p. 1123-1135 13 p.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
Bayesian updating to estimate extinction from sequential observation data
Thompson, C. J., Kodikara, S., Burgman, M. A., Demirhan, H. & Stone, L., Jan 2019, In: Biological Conservation. 229, p. 26-29 4 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Network motifs and their origins
Stone, L., Simberloff, D. & Artzy-Randrup, Y., Apr 2019, In: PLoS Computational Biology. 15, 4, p. 1-7 7 p., e1006749.Research output: Contribution to journal › Article › peer-review
Open Access54 Scopus citations -
Quantifying the Holocaust: Hyperintense kill rates during the Nazi genocide
Stone, L., 2019, In: Science advances. 5, 1, eaau7292.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
Understanding the connections between species distribution models for presence-background data
Wang, Y. & Stone, L., 1 Mar 2019, In: Theoretical Ecology. 12, 1, p. 73-88 16 p.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
2018
Backward bifurcation and hysteresis in models of recurrent tuberculosis
Wangari, I. M. & Stone, L., Mar 2018, In: PLoS ONE. 13, 3, Y.Research output: Contribution to journal › Article › peer-review
Open Access28 Scopus citations -
Controllability of complex networks: Choosing the best driver set
Amani, A. M., Jalili, M., Yu, X. & Stone, L., 24 Sep 2018, In: Physical Review E. 98, 3, 030302.Research output: Contribution to journal › Article › peer-review
16 Scopus citations -
Inferring about the extinction of a species using certain and uncertain sightings
Kodikara, S., Demirhan, H. & Stone, L., 7 Apr 2018, In: Journal of Theoretical Biology. 442, p. 98-109 12 p.Research output: Contribution to journal › Article › peer-review
5 Scopus citations -
Meningitis epidemics shift in sub-Saharan belt
Zhao, S., Lin, Q., He, D. & Stone, L., Mar 2018, In: International Journal of Infectious Diseases. 68, p. 79-82 4 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Modelling heterogeneity in host susceptibility to tuberculosis and its effect on public health interventions
Wangari, I. M., Trauer, J. & Stone, L., 1 Nov 2018, In: PLoS ONE. 13, 11, e0206603.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Modelling the large-scale yellow fever outbreak in Luanda, Angola, and the impact of vaccination
Zhao, S., Stone, L., Gao, D. & He, D., Jan 2018, In: PLoS Neglected Tropical Diseases. 12, 1, e0006158.Research output: Contribution to journal › Article › peer-review
Open Access73 Scopus citations -
The feasibility and stability of large complex biological networks: A random matrix approach
Stone, L., 1 Dec 2018, In: Scientific Reports. 8, 1, 8246.Research output: Contribution to journal › Article › peer-review
Open Access56 Scopus citations -
2017
Analysis of a Heroin Epidemic Model with Saturated Treatment Function
Wangari, I. M. & Stone, L., 2017, In: Journal of Applied Mathematics. 2017, 1953036.Research output: Contribution to journal › Article › peer-review
Open Access30 Scopus citations -
Analysis of Influenza and RSV dynamics in the community using a 'Local Transmission Zone' approach
Almogy, G., Stone, L., Bernevig, B. A., Wolf, D. G., Dorozko, M., Moses, A. E. & Nir-Paz, R., 9 Feb 2017, In: Scientific Reports. 7, 42012.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Finding the most influential nodes in pinning controllability of complex networks
Amani, A. M., Jalili, M., Yu, X. & Stone, L., 2017, In: IEEE Transactions on Circuits and Systems II: Express Briefs. 64, 6, p. 685-689 5 p., 7547284.Research output: Contribution to journal › Article › peer-review
47 Scopus citations -
Inferring extinctions II: A practical, iterative model based on records and surveys
Thompson, C. J., Koshkina, V., Burgman, M. A., Butchart, S. H. M. & Stone, L., Oct 2017, In: Biological Conservation. 214, p. 328-335 8 p.Research output: Contribution to journal › Article › peer-review
32 Scopus citations -
Integrated species distribution models: combining presence-background data and site-occupany data with imperfect detection
Koshkina, V., Wang, Y., Gordon, A., Dorazio, R. M., White, M. & Stone, L., 1 Apr 2017, In: Methods in Ecology and Evolution. 8, 4, p. 420-430 11 p.Research output: Contribution to journal › Article › peer-review
Open Access90 Scopus citations -
2016
A discrete Markov metapopulation model for persistence and extinction of species
Thompson, C. J., Shtilerman, E. & Stone, L., 7 Sep 2016, In: Journal of Theoretical Biology. 404, p. 391-397 7 p.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
Backward bifurcation in epidemic models: Problems arising with aggregated bifurcation parameters
Wangari, I. M., Davis, S. & Stone, L., 15 Jan 2016, In: Applied Mathematical Modelling. 40, 2, p. 1669-1675 7 p.Research output: Contribution to journal › Article › peer-review
Open Access29 Scopus citations -
Effective Augmentation of Complex Networks
Wang, J., Yu, X. & Stone, L., 11 May 2016, In: Scientific Reports. 6, 25627.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Model-based reconstruction of an epidemic using multiple datasets: Understanding influenza A/H1N1 pandemic dynamics in Israel
Yaari, R., Katriel, G., Stone, L., Mendelson, E., Mandelboim, M. & Huppert, A., 1 Mar 2016, In: Journal of the Royal Society Interface. 13, 116, 20160099.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
The Google matrix controls the stability of structured ecological and biological networks
Stone, L., 30 Sep 2016, In: Nature Communications. 7, 12857.Research output: Contribution to journal › Article › peer-review
Open Access19 Scopus citations